Uncharacterized ORF HUR1 influences the efficiency of non-homologous end-joining repair in Saccharomyces cerevisiae

  • Katayoun Omidi
  • , Matthew Jessulat
  • , Mohsen Hooshyar
  • , Daniel Burnside
  • , Andrew Schoenrock
  • , Tom Kazmirchuk
  • , Maryam Hajikarimlou
  • , Mary Daniel
  • , Houman Moteshareie
  • , Urvi Bhojoo
  • , Megan Sanders
  • , Dindial Ramotar
  • , Frank Dehne
  • , Bahram Samanfar
  • , Mohan Babu
  • , Ashkan Golshani*
  • *Corresponding author for this work

Research output: Contribution to journalArticlepeer-review

Abstract

Non-Homologous End Joining (NHEJ) is a highly conserved pathway that repairs Double-Strand Breaks (DSBs) within DNA. Here we show that the deletion of yeast uncharacterized ORF HUR1, Hydroxyurea Resistance1 affects the efficiency of NHEJ. Our findings are supported by Protein-Protein Interaction (PPI), genetic interaction and drug sensitivity analyses. To assess the activity of HUR1 in DSB repair, we deleted its non-overlapping region with PMR1, referred to as HUR1-A. We observed that similar to deletion of TPK1 and NEJ1, and unlike YKU70 (important for NHEJ of DNA with overhang and not blunt end), deletion of HUR1-A reduced the efficiency of NHEJ in both overhang and blunt end plasmid repair assays. Similarly, a chromosomal repair assay showed a reduction for repair efficiency when HUR1-A was deleted. In agreement with a functional connection for Hur1p with Tpk1p and NEJ1p, double mutant strains Δhur1-A/Δtpk1, and Δhur1-A/Δnej1 showed the same reduction in the efficiency of plasmid repair, compared to both single deletion strains. Also, using a Homologous Recombination (HR) specific plasmid-based DSB repair assay we observed that deletion of HUR1-A influenced the efficiency of HR repair, suggesting that HUR1 might also play additional roles in other DNA repair pathways.

Original languageEnglish
Pages (from-to)128-136
Number of pages9
JournalGene
Volume639
DOIs
Publication statusPublished - 10 Jan 2018
Externally publishedYes

Keywords

  • DNA repair
  • Double-strand breaks
  • Genetic interaction
  • HUR1
  • Homologous recombination
  • NEJ1
  • Non-homologous end joining
  • Plasmid repair assay
  • Protein-protein interaction
  • Saccharomyces cerevisiae
  • TPK1
  • YKU70
  • Yeast

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