TY - JOUR
T1 - Uncharacterized ORF HUR1 influences the efficiency of non-homologous end-joining repair in Saccharomyces cerevisiae
AU - Omidi, Katayoun
AU - Jessulat, Matthew
AU - Hooshyar, Mohsen
AU - Burnside, Daniel
AU - Schoenrock, Andrew
AU - Kazmirchuk, Tom
AU - Hajikarimlou, Maryam
AU - Daniel, Mary
AU - Moteshareie, Houman
AU - Bhojoo, Urvi
AU - Sanders, Megan
AU - Ramotar, Dindial
AU - Dehne, Frank
AU - Samanfar, Bahram
AU - Babu, Mohan
AU - Golshani, Ashkan
N1 - Publisher Copyright:
© 2017 Elsevier B.V.
PY - 2018/1/10
Y1 - 2018/1/10
N2 - Non-Homologous End Joining (NHEJ) is a highly conserved pathway that repairs Double-Strand Breaks (DSBs) within DNA. Here we show that the deletion of yeast uncharacterized ORF HUR1, Hydroxyurea Resistance1 affects the efficiency of NHEJ. Our findings are supported by Protein-Protein Interaction (PPI), genetic interaction and drug sensitivity analyses. To assess the activity of HUR1 in DSB repair, we deleted its non-overlapping region with PMR1, referred to as HUR1-A. We observed that similar to deletion of TPK1 and NEJ1, and unlike YKU70 (important for NHEJ of DNA with overhang and not blunt end), deletion of HUR1-A reduced the efficiency of NHEJ in both overhang and blunt end plasmid repair assays. Similarly, a chromosomal repair assay showed a reduction for repair efficiency when HUR1-A was deleted. In agreement with a functional connection for Hur1p with Tpk1p and NEJ1p, double mutant strains Δhur1-A/Δtpk1, and Δhur1-A/Δnej1 showed the same reduction in the efficiency of plasmid repair, compared to both single deletion strains. Also, using a Homologous Recombination (HR) specific plasmid-based DSB repair assay we observed that deletion of HUR1-A influenced the efficiency of HR repair, suggesting that HUR1 might also play additional roles in other DNA repair pathways.
AB - Non-Homologous End Joining (NHEJ) is a highly conserved pathway that repairs Double-Strand Breaks (DSBs) within DNA. Here we show that the deletion of yeast uncharacterized ORF HUR1, Hydroxyurea Resistance1 affects the efficiency of NHEJ. Our findings are supported by Protein-Protein Interaction (PPI), genetic interaction and drug sensitivity analyses. To assess the activity of HUR1 in DSB repair, we deleted its non-overlapping region with PMR1, referred to as HUR1-A. We observed that similar to deletion of TPK1 and NEJ1, and unlike YKU70 (important for NHEJ of DNA with overhang and not blunt end), deletion of HUR1-A reduced the efficiency of NHEJ in both overhang and blunt end plasmid repair assays. Similarly, a chromosomal repair assay showed a reduction for repair efficiency when HUR1-A was deleted. In agreement with a functional connection for Hur1p with Tpk1p and NEJ1p, double mutant strains Δhur1-A/Δtpk1, and Δhur1-A/Δnej1 showed the same reduction in the efficiency of plasmid repair, compared to both single deletion strains. Also, using a Homologous Recombination (HR) specific plasmid-based DSB repair assay we observed that deletion of HUR1-A influenced the efficiency of HR repair, suggesting that HUR1 might also play additional roles in other DNA repair pathways.
KW - DNA repair
KW - Double-strand breaks
KW - Genetic interaction
KW - HUR1
KW - Homologous recombination
KW - NEJ1
KW - Non-homologous end joining
KW - Plasmid repair assay
KW - Protein-protein interaction
KW - Saccharomyces cerevisiae
KW - TPK1
KW - YKU70
KW - Yeast
UR - https://www.scopus.com/pages/publications/85039561888
U2 - 10.1016/j.gene.2017.10.003
DO - 10.1016/j.gene.2017.10.003
M3 - Article
C2 - 28987344
AN - SCOPUS:85039561888
SN - 0378-1119
VL - 639
SP - 128
EP - 136
JO - Gene
JF - Gene
ER -