Introducing the Lipidomics Minimal Reporting Checklist

Jeffrey G. McDonald; Christer S. Ejsing; Dominik Kopczynski; Michal Holčapek; Junken Aoki; Makoto Arita; Masanori Arita; Erin S. Baker; Justine Bertrand-Michel; John A. Bowden; Britta Brügger; Shane R. Ellis; Maria Fedorova; William J. Griffiths; Xianlin Han; Jürgen Hartler; Nils Hoffmann; Jeremy P. Koelmel; Harald C. Köfeler; Todd W. Mitchell; Valerie B. O’Donnell; Daisuke Saigusa; Dominik Schwudke; Andrej Shevchenko; Candice Z. Ulmer; Markus R. Wenk; Michael Witting; Denise Wolrab; Yu Xia; Robert Ahrends; Gerhard Liebisch; Kim Ekroos

doi:10.1038/s42255-022-00628-3

Introducing the Lipidomics Minimal Reporting Checklist

Jeffrey G. McDonald
, Christer S. Ejsing
, Dominik Kopczynski
, Michal Holčapek
, Junken Aoki
, Makoto Arita
, Masanori Arita
, Erin S. Baker
, Justine Bertrand-Michel
, John A. Bowden
, Britta Brügger
, Shane R. Ellis
, Maria Fedorova
, William J. Griffiths
, Xianlin Han
, Jürgen Hartler
, Nils Hoffmann
, Jeremy P. Koelmel
, Harald C. Köfeler
, Todd W. Mitchell

Valerie B. O’Donnell, Daisuke Saigusa, Dominik Schwudke, Andrej Shevchenko, Candice Z. Ulmer, Markus R. Wenk, Michael Witting, Denise Wolrab, Yu Xia, Robert Ahrends^*, Gerhard Liebisch^*, Kim Ekroos^*

^*Corresponding author for this work

University of Texas Southwestern Medical Center
University of Southern Denmark
European Molecular Biology Laboratory
University of Vienna
University of Pardubice
Tohoku University
The University of Tokyo
RIKEN
Research Organization of Information and Systems, National Institute of Genetics Mishima
North Carolina State University
Institut national de la santé et de la recherche médicale
University of Florida
Heidelberg University
University of Wollongong
Illawarra Heath and Medical Research Institute
Technische Universität Dresden
Swansea University
University of Texas Health Science Center at San Antonio
University of Graz
Bielefeld University
Yale University
Medical University of Graz
Cardiff University
Research Center Borstel - Leibniz Lung Center
Partner Site Hamburg-Lübeck-Borstel-Riems
Max Planck Institute of Molecular Cell Biology and Genetics
US Department of Agriculture
National University of Singapore
Helmholtz Zentrum München - German Research Center for Environmental Health
Tsinghua University
University of Regensburg
Lipidomics Consulting Ltd.

Research output: Contribution to journal › Comment/debate

71 Citations (Scopus)

Abstract

The rapid increase in lipidomic data has triggered a community-based movement to develop guidelines and minimum requirements for generating, reporting and publishing lipidomic data. The creation of a dynamic checklist summarizing key details of lipidomic analyses using a common language has the potential to harmonize the field by improving both traceability and reproducibility.

Original language	English
Pages (from-to)	1086-1088
Number of pages	3
Journal	Nature Metabolism
Volume	4
Issue number	9
DOIs	https://doi.org/10.1038/s42255-022-00628-3
Publication status	Published - Sept 2022
Externally published	Yes

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McDonald, J. G., Ejsing, C. S., Kopczynski, D., Holčapek, M., Aoki, J., Arita, M., Arita, M., Baker, E. S., Bertrand-Michel, J., Bowden, J. A., Brügger, B., Ellis, S. R., Fedorova, M., Griffiths, W. J., Han, X., Hartler, J., Hoffmann, N., Koelmel, J. P., Köfeler, H. C., ... Ekroos, K. (2022). Introducing the Lipidomics Minimal Reporting Checklist. Nature Metabolism, 4(9), 1086-1088. https://doi.org/10.1038/s42255-022-00628-3

@article{55b8eb00f0ef4d44ae9a1c986ac9560d,

title = "Introducing the Lipidomics Minimal Reporting Checklist",

abstract = "The rapid increase in lipidomic data has triggered a community-based movement to develop guidelines and minimum requirements for generating, reporting and publishing lipidomic data. The creation of a dynamic checklist summarizing key details of lipidomic analyses using a common language has the potential to harmonize the field by improving both traceability and reproducibility.",

author = "McDonald, \{Jeffrey G.\} and Ejsing, \{Christer S.\} and Dominik Kopczynski and Michal Hol{\v c}apek and Junken Aoki and Makoto Arita and Masanori Arita and Baker, \{Erin S.\} and Justine Bertrand-Michel and Bowden, \{John A.\} and Britta Br{\"u}gger and Ellis, \{Shane R.\} and Maria Fedorova and Griffiths, \{William J.\} and Xianlin Han and J{\"u}rgen Hartler and Nils Hoffmann and Koelmel, \{Jeremy P.\} and K{\"o}feler, \{Harald C.\} and Mitchell, \{Todd W.\} and O{\textquoteright}Donnell, \{Valerie B.\} and Daisuke Saigusa and Dominik Schwudke and Andrej Shevchenko and Ulmer, \{Candice Z.\} and Wenk, \{Markus R.\} and Michael Witting and Denise Wolrab and Yu Xia and Robert Ahrends and Gerhard Liebisch and Kim Ekroos",

year = "2022",

month = sep,

doi = "10.1038/s42255-022-00628-3",

language = "English",

volume = "4",

pages = "1086--1088",

journal = "Nature Metabolism",

issn = "2522-5812",

publisher = "Nature Research",

number = "9",

}

McDonald, JG, Ejsing, CS, Kopczynski, D, Holčapek, M, Aoki, J, Arita, M, Arita, M, Baker, ES, Bertrand-Michel, J, Bowden, JA, Brügger, B, Ellis, SR, Fedorova, M, Griffiths, WJ, Han, X, Hartler, J, Hoffmann, N, Koelmel, JP, Köfeler, HC, Mitchell, TW, O’Donnell, VB, Saigusa, D, Schwudke, D, Shevchenko, A, Ulmer, CZ, Wenk, MR, Witting, M, Wolrab, D, Xia, Y, Ahrends, R, Liebisch, G & Ekroos, K 2022, 'Introducing the Lipidomics Minimal Reporting Checklist', Nature Metabolism, vol. 4, no. 9, pp. 1086-1088. https://doi.org/10.1038/s42255-022-00628-3

TY - JOUR

T1 - Introducing the Lipidomics Minimal Reporting Checklist

AU - McDonald, Jeffrey G.

AU - Ejsing, Christer S.

AU - Kopczynski, Dominik

AU - Holčapek, Michal

AU - Aoki, Junken

AU - Arita, Makoto

AU - Arita, Masanori

AU - Baker, Erin S.

AU - Bertrand-Michel, Justine

AU - Bowden, John A.

AU - Brügger, Britta

AU - Ellis, Shane R.

AU - Fedorova, Maria

AU - Griffiths, William J.

AU - Han, Xianlin

AU - Hartler, Jürgen

AU - Hoffmann, Nils

AU - Koelmel, Jeremy P.

AU - Köfeler, Harald C.

AU - Mitchell, Todd W.

AU - O’Donnell, Valerie B.

AU - Saigusa, Daisuke

AU - Schwudke, Dominik

AU - Shevchenko, Andrej

AU - Ulmer, Candice Z.

AU - Wenk, Markus R.

AU - Witting, Michael

AU - Wolrab, Denise

AU - Xia, Yu

AU - Ahrends, Robert

AU - Liebisch, Gerhard

AU - Ekroos, Kim

PY - 2022/9

Y1 - 2022/9

N2 - The rapid increase in lipidomic data has triggered a community-based movement to develop guidelines and minimum requirements for generating, reporting and publishing lipidomic data. The creation of a dynamic checklist summarizing key details of lipidomic analyses using a common language has the potential to harmonize the field by improving both traceability and reproducibility.

AB - The rapid increase in lipidomic data has triggered a community-based movement to develop guidelines and minimum requirements for generating, reporting and publishing lipidomic data. The creation of a dynamic checklist summarizing key details of lipidomic analyses using a common language has the potential to harmonize the field by improving both traceability and reproducibility.

UR - https://www.scopus.com/pages/publications/85136823326

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DO - 10.1038/s42255-022-00628-3

M3 - Comment/debate

C2 - 35934691

AN - SCOPUS:85136823326

SN - 2522-5812

VL - 4

SP - 1086

EP - 1088

JO - Nature Metabolism

JF - Nature Metabolism

IS - 9

ER -

Introducing the Lipidomics Minimal Reporting Checklist

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