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High resolution mapping and mutation analyses of candidate genes in the urofacial syndrome (UFS) critical region

  • Cong Yi Wang
  • , Abodoreza Davoodi-Semiromi
  • , Jing Da Shi
  • , Ping Yang
  • , Yi Qun Huang
  • , Jose A.G. Agundez
  • , Jose M. Moran
  • , Bernardo Ochoa
  • , Bobbilynn Hawkins-Lee
  • , Jin Xiong She*
  • *Corresponding author for this work
  • Center for Biotechnology and Genomic Medicine
  • Augusta University
  • University of Florida
  • Universidad de Antioquia

Research output: Contribution to journalArticlepeer-review

Abstract

The urofacial (Ochoa) syndrome (UFS) characterized by congenital obstructive uropathy and abnormal facial expression is a rare disorder caused by a single recessive disease gene. Our previous studies using homozygosity mapping have located the UFS gene to a genomic interval of approximately 360 kb on chromosome 10q23-10q24. In this study, we have constructed a genomic sequence map covering the entire UFS interval and narrowed the disease interval to a genomic region of 220 kb that harbor the newly identified ACDP1 gene in addition to part of the GOT1 gene which has already been excluded as a candidate for UFS. Extensive search for mutations in the coding region, the 5′ and 3′ untranslated regions, the promoter region, and the exon/intron junctions failed to identify a pathogenic mutation in UFS patients. Furthermore, our analyses indicated that the same gene on chromosome 10q is responsible for all UFS patients from multiple ethnic groups.

Original languageEnglish
Pages (from-to)9-14
Number of pages6
JournalAmerican Journal of Medical Genetics
Volume119 A
Issue number1
DOIs
Publication statusPublished - 15 May 2003
Externally publishedYes

Keywords

  • Homozygosity mapping
  • Microsatellite
  • Mutation analysis
  • Physical mapping
  • Urofacial syndrome

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