TY - JOUR
T1 - Functional Interpretation of a Novel Homozygous METTL5 Variant Associated with ADHD and Neurodevelopmental Abnormalities
T2 - A Case Report and Literature Review
AU - Hashem, Sheema
AU - Elhag, Saba F.
AU - Bhat, Ajaz A.
AU - Aamer, Waleed
AU - Al-Maraghi, Aljazi
AU - Alhaboub, Hala
AU - Abuthaher, Dalya
AU - Akil, Ammira S.Al Shabeeb
AU - Haris, Mohammad
AU - Fakhro, Khalid
AU - Nemer, Georges
AU - Kamal, Madeeha
N1 - Publisher Copyright:
© 2025 by the authors.
PY - 2025/12/15
Y1 - 2025/12/15
N2 - Background and Clinical Significance: Methyltransferase-like protein 5 (METTL5) is a conserved RNA methyltransferase responsible for catalyzing the N6-methyladenosine (m6A) modification of 18S ribosomal RNA, a process critical for ribosome biogenesis and translational regulation. Biallelic variants in METTL5 have been linked to autosomal recessive intellectual developmental disorder-72 (MRT72), typically presenting with microcephaly, intellectual disability, and speech delay. However, the association between METTL5 and isolated attention-deficit/hyperactivity disorder (ADHD) remains underexplored. Case Presentation: We report a 14-year-old Qatari female, born to consanguineous parents, who presented with microcephaly, speech delay, learning difficulties, and inattentive-type ADHD. Trio-based whole-genome sequencing identified a novel homozygous METTL5 variant (c.617G > A; p. Arg206Gln), with both parent's heterozygous carriers. The variant is extremely rare (gnomAD MAF: 0.0000175) and predicted to be deleterious (CADD: 23.7; SIFT: damaging; PolyPhen-2: probably damaging). Structural modeling localized the change within the SAM-dependent catalytic domain, predicting protein destabilization (Delta Delta G = +1.8 kcal/mol). The affected residue is highly conserved (ConSurf score: 8), and protein-protein interaction analysis linked METTL5 with METTL14, METTL16, and ZCCHC4, key regulators of rRNA methylation. Conclusions: In silico evidence suggests that the p. Arg206Gln variant disrupts METTL5 function, likely contributing to the observed neurodevelopmental phenotype, including ADHD. This expands the clinical spectrum of METTL5-related disorders and supports its inclusion in neurodevelopmental gene panels.
AB - Background and Clinical Significance: Methyltransferase-like protein 5 (METTL5) is a conserved RNA methyltransferase responsible for catalyzing the N6-methyladenosine (m6A) modification of 18S ribosomal RNA, a process critical for ribosome biogenesis and translational regulation. Biallelic variants in METTL5 have been linked to autosomal recessive intellectual developmental disorder-72 (MRT72), typically presenting with microcephaly, intellectual disability, and speech delay. However, the association between METTL5 and isolated attention-deficit/hyperactivity disorder (ADHD) remains underexplored. Case Presentation: We report a 14-year-old Qatari female, born to consanguineous parents, who presented with microcephaly, speech delay, learning difficulties, and inattentive-type ADHD. Trio-based whole-genome sequencing identified a novel homozygous METTL5 variant (c.617G > A; p. Arg206Gln), with both parent's heterozygous carriers. The variant is extremely rare (gnomAD MAF: 0.0000175) and predicted to be deleterious (CADD: 23.7; SIFT: damaging; PolyPhen-2: probably damaging). Structural modeling localized the change within the SAM-dependent catalytic domain, predicting protein destabilization (Delta Delta G = +1.8 kcal/mol). The affected residue is highly conserved (ConSurf score: 8), and protein-protein interaction analysis linked METTL5 with METTL14, METTL16, and ZCCHC4, key regulators of rRNA methylation. Conclusions: In silico evidence suggests that the p. Arg206Gln variant disrupts METTL5 function, likely contributing to the observed neurodevelopmental phenotype, including ADHD. This expands the clinical spectrum of METTL5-related disorders and supports its inclusion in neurodevelopmental gene panels.
KW - Attention-deficit/hyperactivity disorder
KW - Consanguinity
KW - Methyltransferase Like 5
KW - Microcephaly
KW - Neurodevelopmental disorder
KW - Novel variant
KW - RNA methylation
KW - Trio analysis
KW - Whole-genome sequencing
UR - https://www.scopus.com/pages/publications/105026323398
U2 - 10.3390/genes16121502
DO - 10.3390/genes16121502
M3 - Article
C2 - 41465175
AN - SCOPUS:105026323398
SN - 2073-4425
VL - 16
JO - Genes
JF - Genes
IS - 12
M1 - 1502
ER -